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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7779827 chr7:140174712 T/C LOC441455 chr9:99488103-99489749:+ 0.46 6.11 2.06E-9 Box Plot
THCA rs77819282 chr17:44762589 G/A C17orf69 chr17:43716341-43723594:+ 0.39 9.61 4.25E-20 Box Plot
THCA rs77819282 chr17:44762589 G/A LOC644172 chr17:43677491-43679748:- 0.71 12.05 2.24E-29 Box Plot
THCA rs77819282 chr17:44762589 G/A LRRC37A4 chr17:43578685-43595516:- -0.45 -11.14 8.59E-26 Box Plot
THCA rs77819282 chr17:44762589 G/A MGC57346 chr17:43697712-43715327:+ 0.34 7.26 1.63E-12 Box Plot
THCA rs77835152 chr12:25344104 G/A CSNK2A1P chr11:11373323-11374904:- -0.33 -6.16 1.58E-9 Box Plot
THCA rs7784558 chr7:140158596 T/C LOC441455 chr9:99488103-99489749:+ 0.5 6.77 3.74E-11 Box Plot
THCA rs77850688 chr3:107818444 G/A MICAL2 chr11:12115555-12285336:+ 0.34 6 4.0E-9 Box Plot
THCA rs77853293 chr5:49840113 C/T LOC647121 chr1:121260910-121313686:+ -0.38 -7.71 7.46E-14 Box Plot
THCA rs7786604 chr7:89070008 T/C RAB40B chr17:80612849-80656604:- 0.34 5.91 6.56E-9 Box Plot
THCA rs7786610 chr7:89070018 T/C RAB40B chr17:80612849-80656604:- 0.34 5.91 6.56E-9 Box Plot
THCA rs7786776 chr7:140168987 G/A LOC441455 chr9:99488103-99489749:+ 0.48 6.39 3.92E-10 Box Plot
THCA rs7786843 chr7:140161784 G/A LOC441455 chr9:99488103-99489749:+ 0.49 6.6 1.1E-10 Box Plot
THCA rs7787217 chr7:140169208 G/A LOC441455 chr9:99488103-99489749:+ 0.48 6.39 3.92E-10 Box Plot
THCA rs77890961 chr3:96787836 G/A PRPF31 chr19:54618790-54635150:+ -0.38 -5.99 4.08E-9 Box Plot